An Intelligent System for Building Bioinformatics Workflows

Salvatore Gaglio, Massimo La Rosa, Antonino Fiannaca, Alfonso Urso, Salvatore Gaglio, Riccardo Rizzo

Risultato della ricerca: Other

2 Citazioni (Scopus)

Abstract

In this paper a new intelligent system designed to support the researcher in the development of a workflow for bioinformatics experiments is presented. The proposed system is capable to suggest one or more strategies in order to resolve the selected problem and to support the user in the assembly of a workflow for complex experiments, using a a Knowledge base, representing the expertise about the application domain, and a Rule-Based system for decision-making activity. Moreover, the system can represent this workflow at different abstraction layers, freeing the user from implementation details and assisting him in the correct configuration of the algorithms. A sample workflow for protein complex extraction from protein-protein interaction network is presented in order to show the main features of the proposed workflow representation.
Lingua originaleEnglish
Pagine212-218
Numero di pagine7
Stato di pubblicazionePublished - 2012

Fingerprint

Intelligent systems
Bioinformatics
Proteins
Knowledge based systems
Decision making
Experiments

All Science Journal Classification (ASJC) codes

  • Artificial Intelligence
  • Software

Cita questo

Gaglio, S., La Rosa, M., Fiannaca, A., Urso, A., Gaglio, S., & Rizzo, R. (2012). An Intelligent System for Building Bioinformatics Workflows. 212-218.

An Intelligent System for Building Bioinformatics Workflows. / Gaglio, Salvatore; La Rosa, Massimo; Fiannaca, Antonino; Urso, Alfonso; Gaglio, Salvatore; Rizzo, Riccardo.

2012. 212-218.

Risultato della ricerca: Other

Gaglio, S, La Rosa, M, Fiannaca, A, Urso, A, Gaglio, S & Rizzo, R 2012, 'An Intelligent System for Building Bioinformatics Workflows', pagg. 212-218.
Gaglio S, La Rosa M, Fiannaca A, Urso A, Gaglio S, Rizzo R. An Intelligent System for Building Bioinformatics Workflows. 2012.
Gaglio, Salvatore ; La Rosa, Massimo ; Fiannaca, Antonino ; Urso, Alfonso ; Gaglio, Salvatore ; Rizzo, Riccardo. / An Intelligent System for Building Bioinformatics Workflows. 7 pag.
@conference{abcbf52c2a494e95abdb3a31248e2dda,
title = "An Intelligent System for Building Bioinformatics Workflows",
abstract = "In this paper a new intelligent system designed to support the researcher in the development of a workflow for bioinformatics experiments is presented. The proposed system is capable to suggest one or more strategies in order to resolve the selected problem and to support the user in the assembly of a workflow for complex experiments, using a a Knowledge base, representing the expertise about the application domain, and a Rule-Based system for decision-making activity. Moreover, the system can represent this workflow at different abstraction layers, freeing the user from implementation details and assisting him in the correct configuration of the algorithms. A sample workflow for protein complex extraction from protein-protein interaction network is presented in order to show the main features of the proposed workflow representation.",
author = "Salvatore Gaglio and {La Rosa}, Massimo and Antonino Fiannaca and Alfonso Urso and Salvatore Gaglio and Riccardo Rizzo",
year = "2012",
language = "English",
pages = "212--218",

}

TY - CONF

T1 - An Intelligent System for Building Bioinformatics Workflows

AU - Gaglio, Salvatore

AU - La Rosa, Massimo

AU - Fiannaca, Antonino

AU - Urso, Alfonso

AU - Gaglio, Salvatore

AU - Rizzo, Riccardo

PY - 2012

Y1 - 2012

N2 - In this paper a new intelligent system designed to support the researcher in the development of a workflow for bioinformatics experiments is presented. The proposed system is capable to suggest one or more strategies in order to resolve the selected problem and to support the user in the assembly of a workflow for complex experiments, using a a Knowledge base, representing the expertise about the application domain, and a Rule-Based system for decision-making activity. Moreover, the system can represent this workflow at different abstraction layers, freeing the user from implementation details and assisting him in the correct configuration of the algorithms. A sample workflow for protein complex extraction from protein-protein interaction network is presented in order to show the main features of the proposed workflow representation.

AB - In this paper a new intelligent system designed to support the researcher in the development of a workflow for bioinformatics experiments is presented. The proposed system is capable to suggest one or more strategies in order to resolve the selected problem and to support the user in the assembly of a workflow for complex experiments, using a a Knowledge base, representing the expertise about the application domain, and a Rule-Based system for decision-making activity. Moreover, the system can represent this workflow at different abstraction layers, freeing the user from implementation details and assisting him in the correct configuration of the algorithms. A sample workflow for protein complex extraction from protein-protein interaction network is presented in order to show the main features of the proposed workflow representation.

UR - http://hdl.handle.net/10447/74856

M3 - Other

SP - 212

EP - 218

ER -