We introduce a generalization of the Burrows-Wheeler Transform (BWT) that can be applied to a multiset of words. The extended transformation, denoted by E, is reversible, but, differently from BWT, it is also surjective. The E transformation allows to give a definition of distance between two sequences, that we apply here to the problem of the whole mitochondrial genome phylogeny. Moreover we give some consideration about compressing a set of words by using the E transformation as preprocessing.
|Titolo della pubblicazione ospite||LNCS|
|Numero di pagine||12|
|Stato di pubblicazione||Published - 2005|
All Science Journal Classification (ASJC) codes
- Theoretical Computer Science
- Computer Science(all)