• 665 Citazioni
  • 14 Indice H
20022019
In caso di modifiche a Pure, queste saranno visibili qui a breve.

Risultato della ricerca 2004 2019

  • 665 Citazioni
  • 14 Indice H
  • 41 Article
  • 18 Chapter
  • 6 Other
  • 2 Conference contribution
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Article
2019
2 Citazioni (Scopus)

Analyzing big datasets of genomic sequences: Fast and scalable collection of k-mer statistics

Giancarlo, R., Rombo, S. E., Sorella, M., Ferraro Petrillo, U. & Cattaneo, G., 2019, In : BMC Bioinformatics. 20, pag. 138-151 14 pag.

Risultato della ricerca: Article

Genomics
Electric sparks
Statistics
Technology
MapReduce
1 Citazione (Scopus)
Chromatin
Computer science
Computer Science
Genome
DNA
2018
8 Citazioni (Scopus)

Informational and linguistic analysis of large genomic sequence collections via efficient Hadoop cluster algorithms

Giancarlo, R., Roscigno, G., Ferraro Petrillo, U., Cattaneo, G. & Ferraro Petrillo, U., 2018, In : Bioinformatics. 34, pag. 1826-1833 8 pag.

Risultato della ricerca: Article

Cluster Algorithm
Linguistics
Genomics
MapReduce
Genome
2 Citazioni (Scopus)
Nucleosomes
Histones
Genome
Genes
Glossaries
2017
16 Citazioni (Scopus)

An effective extension of the applicability of alignment-free biological sequence comparison algorithms with Hadoop

Giancarlo, R., Roscigno, G., Petrillo, U. F. & Cattaneo, G., 2017, In : THE JOURNAL OF SUPERCOMPUTING. 73, pag. 1467-1483 17 pag.

Risultato della ricerca: Article

Sequence Comparison
Alignment
Sequential machines
Computational Biology
Bioinformatics
15 Citazioni (Scopus)

FASTdoop: A versatile and efficient library for the input of FASTA and FASTQ files for MapReduce Hadoop bioinformatics applications

Giancarlo, R., Roscigno, G., Petrillo, U. F. & Cattaneo, G., 2017, In : Bioinformatics. 33, pag. 1575-1577 3 pag.

Risultato della ricerca: Article

MapReduce
Bioinformatics
Computational Biology
Libraries
Availability
2016
9 Citazioni (Scopus)
Nucleosomes
Genome
DNA
Genes
Computational Biology
2015
2 Citazioni (Scopus)

Bayesian versus data driven model selection for microarray data

Lo Bosco, G., Giancarlo, R., Utro, F. & Lo Bosco, G., 2015, In : Natural Computing. 14, pag. 393-402 10 pag.

Risultato della ricerca: Article

Microarrays
Information use
Computer science
Statistical methods
Identification (control systems)
14 Citazioni (Scopus)
Nucleosomes
Glossaries
Epigenomics
Positioning
Genomics
2 Citazioni (Scopus)
Microarray Analysis
Microarrays
Libraries
Cluster Analysis
Cluster analysis
2014
37 Citazioni (Scopus)
DNA sequences
Sequence Analysis
Throughput
Availability
Technology
2013
6 Citazioni (Scopus)
Microarray Data Analysis
Microarray Analysis
Microarrays
Distance Function
Clustering algorithms

Forewords-Special Issue Combinatorial Pattern Matching 2011

Giancarlo, R. & Manzini, G., 2013, In : Theoretical Computer Science. 483, pag. 1-182 182 pag.

Risultato della ricerca: Article

2012
12 Citazioni (Scopus)
Cluster Validity
Microarray Data Analysis
Microarrays
Model Selection
Statistical method
18 Citazioni (Scopus)
Computational Biology
Data compression
Data Compression
Bioinformatics
Compression
2011
42 Citazioni (Scopus)

Genome-wide characterization of chromatin binding and nucleosome spacing activity of the nucleosome remodelling ATPase ISWI

Corona, D., Lo Bosco, G., Giancarlo, R., Di Gesu', V., Lo Bosco, G., Sala, A., Pinello, L. & Toto, M., 2011, In : EMBO Journal. 30, pag. 1766-1777 11 pag.

Risultato della ricerca: Article

Nucleosomes
Chromatin
Adenosine Triphosphatases
Genes
Genome
14 Citazioni (Scopus)
Microarray Data Analysis
Microarray Analysis
Microarrays
Cluster Analysis
Clustering
2009
65 Citazioni (Scopus)

Textual Data Compression In Computational Biology: A synopsis

Giancarlo, R. & Utro, F., 2009, In : Bioinformatics. 2009, pag. 1575-1586 12 pag.

Risultato della ricerca: Article

Data Compression
Computational Biology
Data compression
Software
Information Theory
29 Citazioni (Scopus)

The Myriad Virtes of Wavelet Trees

Giancarlo, R., Ferragina, P. & Manzini, G., 2009, In : Information and Computation. 207, pag. 849-866 18 pag.

Risultato della ricerca: Article

Data compression
Data Compression
Data structures
Data Structures
Wavelets
2008

Algorithms in Bioinformatics

Giancarlo, R. & Hannenhalli, S., 2008, In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 5, pag. 482-483 2 pag.

Risultato della ricerca: Article

6 Citazioni (Scopus)
Pattern Discovery
Computational Analysis
Cluster analysis
Cluster Analysis
Microarrays
36 Citazioni (Scopus)
Cluster Validation
Microarray Data Analysis
Microarray Analysis
Microarrays
Cluster Analysis
3 Citazioni (Scopus)

New Results in Finding Common Neighborhoods in Massive Graphs in the Data Streaming Model

Giancarlo, R., Racz, Buchsbaum & Giancarlo, R., 2008, In : Theoretical Computer Science. 407, pag. 302-309 8 pag.

Risultato della ricerca: Article

Streaming Data
Computer science
Models of Computation
Graph in graph theory
Data Streams
18 Citazioni (Scopus)

Periodicity and repetitions in parameterized strings

Giancarlo, R. & Apostolico, A., 2008, In : Discrete Applied Mathematics. 156, pag. 1389-1398 10 pag.

Risultato della ricerca: Article

Periodicity
Strings
Repetition
2007
7 Citazioni (Scopus)

$O(n^2 logn)$ Time On-line Construction of Two-Dimensional Suffix Trees

Giancarlo, R., Na, J. C. & Park, K., 2007, In : Algorithmica. 48, pag. 173-186

Risultato della ricerca: Article

Suffix Tree
Image Compression
Square matrix
Image compression
Time Constant
4 Citazioni (Scopus)

A basic analysis toolkit for biological sequences

Giancarlo, R. & Utro, F., 2007, In : Algorithms for Molecular Biology. 2007, 16 pag.

Risultato della ricerca: Article

Software
Libraries
Alignment
Sequence Analysis
Approximate String Matching
82 Citazioni (Scopus)

Compression-Based Classification of Biological Sequencesand Structures via the Universal Similarity Metric: ExperimentalAssessment

Giancarlo, R., Ferragina, P., Manzini, G., Valiente, G. & Greco, V., 2007, In : BMC Bioinformatics. 8, pag. 252-252

Risultato della ricerca: Article

Dissimilarity
Compression
Metric
Compressors
Joining

Forewords

Giancarlo, R., 2007, In : LECTURE NOTES IN COMPUTER SCIENCE. lnbi 4645, pag. 5-7

Risultato della ricerca: Article

13 Citazioni (Scopus)
Combinatorial optimization
Combinatorial Optimization
First-principles
Mathematical transformations
Transform
20 Citazioni (Scopus)

TheEngineering of a Compression Booster: Theory Vs Practice in BWTCompression

Giancarlo, R., Ferragina, P. & Manzini, G., 2006, In : LECTURE NOTES IN COMPUTER SCIENCE. 4168, pag. 756-767

Risultato della ricerca: Article

2005
1 Citazione (Scopus)

An O(n^2log n) Time on-line construction of two-dimensional suffix trees

Giancarlo, R., Na, J. C. & Park, K., 2005, In : LECTURE NOTES IN COMPUTER SCIENCE. 3595, pag. 273-282

Risultato della ricerca: Article

72 Citazioni (Scopus)

Boosting Textual Compression in Optimal Linear Time

Sciortino, M., Giancarlo, R., Ferragina, P., Sciortino, M., Giancarlo, R. & Manzini, G., 2005, In : JOURNAL OF THE ASSOCIATION FOR COMPUTING MACHINERY. 52, pag. 688-713

Risultato della ricerca: Article

Compressors
Mathematical transformations
Trees (mathematics)
Data compression
Parameter estimation
33 Citazioni (Scopus)
Gene Expression Data
Gene expression
Cluster Analysis
Genetic algorithms
Genetic Algorithm

Pattern Discovery in the Post-Genome

Giancarlo, R., 2005, In : Theoretical Computer Science. 335, pag. 1-2

Risultato della ricerca: Article

2004
4 Citazioni (Scopus)

Boosting Textual Compression in Optimal Linear Time

Ferragina, P; Manzini, G; Sciortino, M, 2004, In : JOURNAL OF THE ASSOCIATION FOR COMPUTING MACHINERY. 1, pag. 1-10

Risultato della ricerca: Article

Longest Motifs with a Functionally Equivalent Central Block

Giancarlo, R., Crochemore, M. & Sagot, M-F., 2004, In : LECTURE NOTES IN COMPUTER SCIENCE. 3246, pag. 298-310

Risultato della ricerca: Article

Pattern Matching Algorithms

Giancarlo, R., 2004, In : Journal of Discrete Algorithms. 2, pag. 135-136

Risultato della ricerca: Article