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Grazia Cottone

Associate Professor

Former affiliation
  • 843 Citations
  • 15 h-Index
20042020

Research output per year

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Research Output

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Article
2020

Hepatitis B protein HBx binds the DLEU2 lncRNA to sustain cccDNA and host cancer-related gene transcription

Cottone, G., Levrero, M., Guerrieri, F., Pallocca, M., Floriot, O., Salerno, D., Plissonnier, M-L., Paturel, A., Alfano, V., Jeddari, S., Zeisel, M., Chiodo, L. & Belloni, L., 2020, In : Gut. p. 1-9 9 p.

Research output: Contribution to journalArticle

Understanding and Controlling Food Protein Structure and Function in Foods: Perspectives from Experiments and Computer Simulations

Cottone, G., Carloni, P., Mohammad Hosseini Naveh, Z., Gulzar, M., Barroso Da Silva, F. L., Mackernan, D., Jacquier, J. C., Lobaskin, V., Foegeding, E. A., Cheung, D., Radhakrishnan, R., Donnini, S. & Santiso, E. E., 2020, In : Annual review of food science and technology. 11, p. 365-387 22 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2019

More than a Confinement: “Soft” and “Hard” Enzyme Entrapment Modulates Biological Catalyst Function

Cottone, G., Cupane, A., Marchetti, M., Abbruzzetti, S., Ronda, L., Campanini, B., Bettati, S., Viappiani, C., Mozzarelli, A., Giuffrida, S., Bruno, S. & Giuffrida, S., 2019, In : Catalysts. 9, p. 1-29 29 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2018
2 Citations (Scopus)

Closed-Locked and Apo-Resting State Structures of the Human α7 Nicotinic Receptor: A Computational Study

Cottone, G., Maragliano, L., Malliavin, T. E., Chiodo, L., Giuffrida, S. & Giuffrida, S., 2018, In : Journal of Chemical Information and Modeling. 58, p. 2278-2293 16 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)
2017

A possible desensitized state conformation of the human α7 nicotinic receptor: A molecular dynamics study

Cottone, G., Maragliano, L., Cottone, G., Malliavin, T. E. & Chiodo, L., 2017, In : Biophysical Chemistry. 229, p. 99-109 11 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)
5 Citations (Scopus)

The water association band as a marker of hydrogen bonds in trehalose amorphous matrices

Cordone, L., Cottone, G., Cottone, G. & Giuffrida, S., 2017, In : Physical Chemistry Chemical Physics. 19, p. 4251-4265 15 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)
2015

A Structural Model of the Human α7 Nicotinic Receptor in an Open Conformation

Cottone, G., Maragliano, L., Cottone, G., Ciccotti, G., Malliavin, T. E. & Chiodo, L., 2015, In : PLoS One.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Proteins in saccharides matrices and the trehalose peculiarity: Biochemical and biophysical properties

Cupane, A., Emanuele, A., Cordone, L., Cottone, G., Levantino, M., Cottone, G. & Giuffrida, S., 2015, In : Current Organic Chemistry. 19, p. 1684-1706 23 p.

Research output: Contribution to journalArticle

25 Citations (Scopus)

Ultrafast myoglobin structural dynamics observed with an X-ray free-electron laser

Cottone, G., Levantino, M., Cupane, A., Schirò, G., Lemke, H. T., Zhu, D., Glownia, J. M., Ihee, H., Chollet, M. & Cammarata, M., 2015, In : Nature Communications. 6, 6 p.

Research output: Contribution to journalArticle

94 Citations (Scopus)
2014

Conformational changes in acetylcholine binding protein investigated by Temperature Accelerated Molecular Dynamics

Cottone, G., Maragliano, L., Naveh, Z. M. H., Cottone, G., Ciccotti, G. & Malliavin, T. E., 2014, In : PLoS One. 9, 16 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)
2012
8 Citations (Scopus)
2011
9 Citations (Scopus)
42 Citations (Scopus)
2010

Mapping the network of pathways of Co diffusion in myoglobin

Cottone, G., Maragliano, L., Vanden-Eijnden, E. & Ciccotti, G., 2010, In : Journal of the American Chemical Society. 2010-01, p. 1010-1017 7 p.

Research output: Contribution to journalArticle

92 Citations (Scopus)
17 Citations (Scopus)
2009
34 Citations (Scopus)
2008

Density Functional Theory study of the TTC> TTT Isomerization of a Photochromic Spyropiran Merocyanine

Cottone, G., Noto, R. & La Manna, G., 2008, In : Molecules. 13, p. 1246-1252 12 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)
16 Citations (Scopus)
2007
36 Citations (Scopus)
46 Citations (Scopus)

Single Molecule Study of GFP-mut2 Proteins Caged in Trehalose-Water Matrixes: Spatially Inhomogeneous Protein-Water-Sugar Structures

Cottone, G., Cordone, L., Cordone, L., Cottone, G., Collini, M., Cannone, F., Campanini, B., D'Alfonso, L. & Chirico, G., 2007, In : Biophysical Journal. 93, p. 284-293 10 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)
2006

Role of Solvent on Protein-Matrix Coupling in MbCO Embedded in Water-Saccharide Systems: an FTIR study.

Cottone, G., Cordone, L. & Giuffrida, S., 2006, In : Biophysical Journal. 91, p. 968-980 13 p.

Research output: Contribution to journalArticle

46 Citations (Scopus)
2005

Internal Dynamics and Protein-Matrix Coupling in Trehalose Coated Proteins

Palazzo, G., Cottone, G., Cordone, L., Cordone, L., Cottone, G., Viappiani, C., Venturoli, G., Palazzo, G., Giuffrida, S. & Giuffrida, S., 2005, In : BIOCHIMICA ET BIOPHYSICA ACTA. 1749, p. 252-281 30 p.

Research output: Contribution to journalArticle

102 Citations (Scopus)

Molecular Dynamics simulation of sucrose coated and trehalose coated carboxy-myoglobin

Cordone, L., Cottone, G., Cordone, L., Ciccotti, G. & Giuffrida, S., 2005, In : PROTEINS. 59, p. 291-302 12 p.

Research output: Contribution to journalArticle

54 Citations (Scopus)
2004

Atomic mean square displacements in proteins by Molecular Dynamics: a case for analysis of variance

Cordone, L., Cottone, G., Maragliano, L. & Ciccotti, G., 2004, In : Biophysical Journal. 86, p. 2765-2772 8 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)

Theoretical study of the spiropyran-merocyanine thermal isomerization

Cottone, G., Noto, R. & La Manna, G., 2004, In : Chemical Physics Letters. 388, p. 218-222 5 p.

Research output: Contribution to journalArticle

58 Citations (Scopus)